Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929489.1_cds_XP_016476760.1_68561
CDS Infomation

[gene=LOC107798303] [db_xref=GeneID:107798303] [protein=calcium-dependent protein kinase 24-like] [protein_id=XP_016476760.1] [location=join(124223..124404,124682..125024,125474..125597,125718..125861,126031..126183,126364..126479,126608..126775,126934..127167,127289..127435)] [gbkey=CDS]
Sequence

ATGGGGACATGCATGTCTGTACAAAATGCAAGTTTCTTGAAAAGAACAAAAATGAGGCCT
ACTCCTATTGATCAAGAAACTTGTTCCAAGAATTCCAGCCGCACATCCGTTCCTAAATCC
CAGAAATTCTCTCGTCCTATAAATGTCGTTAAGGATCCATCTGGAGATGACATTTACAAG
AGGTACGAGTTTGGGAAGGAGTTAGGAAGAGGAGAGTTTGGAATAACATACCAATGTGTA
GACAAGGAAAGTGGAGAGAATGTGGCATGTAAGACAATAGCAAAGAGCAAGTTAAGGACA
GAGATAGATGTGGAGGATGTGAGGAGGGAGGTGGTAATAATGAGGCATTTGCCTAAACAC
CCTAATATTGTTAGCTATAAGGAAGTTTATGAAGATAAAGAGGCTGTTTATCTTGTTATG
GAACTTTGTGAAGGTGGTGAACTCTTTGATAGAATTGTTGCAAGAGGACATTATACTGAA
AGAGCTGCTGCTCGTGTTACCAAGACTATTCTTGAGGTTGTCCAGGTATGCCACAAGCAT
GGCGTAATTCATAGAGATCTTAAACCTGAGAATTTTTTATATGCCAATACAAGTGAAAAT
GCTCAGTTGAAGGCCATTGACTTTGGCCTTTCTATTTTCTTTGAGCCTACTCAGAGATTT
GGTGAAATAGTTGGAAGTCCATATTACATGGCTCCAGAAGTTCTTAGAAGGAATTATGGA
CCAGAAGTTGATGTGTGGAGTGCCGGTGTTATTCTTTACATTTTGTTATGTGGAGTTCCC
CCTTTTTGGGCAGAAACCGAAGAAGGAATTGCACACGCAATAGTAAAGGGTACAATAGAT
TTTAATAGAGATCCTTGGCCAAGAGTATCAGATGAAGCTAAGGACCTTGTCAAAGGAATG
CTTGATCCAAATCCTTATAACAGGTTGACAGTTGAAGAAGTCCTTGAACATCACTGGATA
CAGAATGCTGAGAAGGTCTCTAACGTATGTTTGGGAGAAGGGGTGAGAGCGAGGATTAAG
CAATTCACTTTGATGAATAAATTCAAGAAAAAAGTTCTCAGAGTTGTAGCAGATAACTTA
CCACAAGATCAAGTTCACGGAATTAAACAAATGTTCTATATGATGGACAGTGACAAAAAT
GGAAACCTAAGTTTCCAAGAACTCAAAGATGGTCTACATATGATGGGGCAATCTGTTGCT
GATCCTGAAGTCCAATTGCTAATGGATGCTGCTGATGTAGATGGAAATGGGATGCTAAAC
TGTGAAGAATTTGTGACAATGGCTGTGCACTTACAGAGGTTAAGCAACGACGATCATCTC
CGCCAAGCTTTCCTTCAATTTGACAAGAATCGAAGTGGATATATTGAGTTTGAAGACTTG
AAAGCTTCTTTGTTTGATGATCATCTTGGCCCCAAGAATGATCAAGCGATCCTCGACATC
ATATCTGATGCTGATTTGGATAAGGATGGAAGGATAAGTTACCAAGATTTCAAGGTCATG
ATGTCAACAGGAATGGATTGGAAGATGGGTTCACGCCAATACTCAAAAGCAATGCTAAAT
GCACTCAGCATGAGACTTTTCAAAGACAAATCCATGCAATTGAAAAATTAA

Peptide Sequence

PEP ID

XP_016476760.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 24-like [Nicotiana tabacum]
Sequence

MGTCMSVQNASFLKRTKMRPTPIDQETCSKNSSRTSVPKSQKFSRPINVVKDPSGDDIYK
RYEFGKELGRGEFGITYQCVDKESGENVACKTIAKSKLRTEIDVEDVRREVVIMRHLPKH
PNIVSYKEVYEDKEAVYLVMELCEGGELFDRIVARGHYTERAAARVTKTILEVVQVCHKH
GVIHRDLKPENFLYANTSENAQLKAIDFGLSIFFEPTQRFGEIVGSPYYMAPEVLRRNYG
PEVDVWSAGVILYILLCGVPPFWAETEEGIAHAIVKGTIDFNRDPWPRVSDEAKDLVKGM
LDPNPYNRLTVEEVLEHHWIQNAEKVSNVCLGEGVRARIKQFTLMNKFKKKVLRVVADNL
PQDQVHGIKQMFYMMDSDKNGNLSFQELKDGLHMMGQSVADPEVQLLMDAADVDGNGMLN
CEEFVTMAVHLQRLSNDDHLRQAFLQFDKNRSGYIEFEDLKASLFDDHLGPKNDQAILDI
ISDADLDKDGRISYQDFKVMMSTGMDWKMGSRQYSKAMLNALSMRLFKDKSMQLKN

Transcript Sequence

Gene sequence data has not been registered.